Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE96083.1KEGG: hmo:HM1_2253 hypothetical protein; SPTR: Putative uncharacterized protein. (105 aa)    
Predicted Functional Partners:
AEE96082.1
Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: cth:Cthe_0498 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).
       0.768
AEE96084.1
Hypothetical protein; KEGG: ssp:SSP0840 accessory gene regulator C; SPTR: Putative uncharacterized protein.
       0.752
AEE96085.1
Aminodeoxychorismate lyase; InterPro IPR003770; KEGG: cce:Ccel_2018 hypothetical protein; PFAM: aminodeoxychorismate lyase; SPTR: Putative uncharacterized protein; PFAM: YceG-like family.
       0.752
AEE96086.1
D-lyxose ketol-isomerase; COGs: COG3822 ABC-type sugar transport system auxiliary component; KEGG: dth:DICTH_0546 YdaE; PRIAM: D-lyxose ketol-isomerase; SPTR: D-lyxose ketol-isomerase family protein.
       0.721
AEE96081.1
RNA polymerase, sigma 28 subunit, FliA/WhiG; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterPro IPR000943: IPR014284: IPR012845: IPR007627: IPR 007630; KEGG: tjr:TherJR_1512 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma fac [...]
       0.673
AEE96079.1
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: cth:Cthe_0492 CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; SPTR: CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
       0.612
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.612
AEE96078.1
CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: dhd:Dhaf_4154 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Putative uncharacterized protein; PFAM: CheW-like domain.
       0.568
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
       0.534
AEE96070.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
       0.534
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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