STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96121.1KEGG: aoe:Clos_1720 hypothetical protein; SPTR: Putative uncharacterized protein. (138 aa)    
Predicted Functional Partners:
AEE96122.1
KEGG: cce:Ccel_0533 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.763
AEE96120.1
COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ate:Athe_0391 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: Preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
       0.726
AEE96829.1
InterPro IPR007227; KEGG: cbh:CLC_2897 rod shape-determining protein MreD; SPTR: Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.723
AEE95388.1
pro-sigmaK processing inhibitor BofA; InterPro IPR010001; KEGG: amt:Amet_4774 sigmaK-factor processing regulatory BofA; PFAM: sigmaK-factor processing regulatory BofA; SPTR: SigmaK-factor processing regulatory BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA.
  
     0.709
AEE96964.1
KEGG: cth:Cthe_2614 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1779).
  
     0.708
AEE95960.1
KEGG: tit:Thit_0102 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.704
AEE97521.1
KEGG: aoe:Clos_2608 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ComK protein.
  
     0.702
AEE96155.1
KEGG: aoe:Clos_1729 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.695
AEE96110.1
Lipoprotein LpqB, GerMN domain protein; COGs: COG5401 Spore germination protein; InterPro IPR019606; KEGG: aoe:Clos_0556 hypothetical protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Putative uncharacterized protein; PFAM: Sporulation and spore germination.
  
     0.688
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.673
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.