STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96205.1NLP/P60 protein; InterPro IPR000064; KEGG: amt:Amet_0654 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: NLP/P60 protein; PFAM: NlpC/P60 family. (142 aa)    
Predicted Functional Partners:
AEE96968.1
ErfK/YbiS/YcfS/YnhG family protein; COGs: COG1376 conserved hypothetical protein; InterPro IPR005490: IPR002477; KEGG: clj:CLJU_c34530 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; SPTR: Conserved protein (Peptidoglycan binding); PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
  
  
 0.502
AEE97116.1
3D domain-containing protein; COGs: COG3583 conserved hypothetical protein; InterPro IPR007137: IPR011098: IPR010611; KEGG: bsu:BSU00400 putative cell wall shaping enzyme; PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; SPTR: Putative uncharacterized protein; PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain.
 
  
 0.499
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.489
AEE95230.1
NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR003646: IPR013247: IPR000064; KEGG: tmt:Tmath_0856 NLP/P60 protein; PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; SPTR: NLP/P60 protein; PFAM: NlpC/P60 family; Bacterial SH3 domain.
  
     0.445
AEE97584.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR008258: IPR016047; KEGG: drm:Dred_0935 peptidase M23B; PFAM: Peptidase M23; Lytic transglycosylase catalytic; SPTR: Peptidase M23B; PFAM: Transglycosylase SLT domain; Peptidase family M23.
  
  
 0.436
AEE97617.1
KEGG: amt:Amet_0842 phage protein; SPTR: Phage protein.
  
    0.434
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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