STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96289.1KEGG: amt:Amet_3035 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: YabP family; TIGRFAM: sporulation protein YqfC. (92 aa)    
Predicted Functional Partners:
AEE96290.1
Sporulation protein YqfD; InterPro IPR010690; KEGG: tmt:Tmath_0960 sporulation protein YqfD; PFAM: stage IV sporulation YqfD; SPTR: Sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; manually curated; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
 
  
 0.994
AEE95973.1
InterPro IPR014198; KEGG: cth:Cthe_0844 stage III sporulation protein spoIIIAB; PFAM: Sporulation stage III protein AB; SPTR: Stage III sporulation protein spoIIIAB; TIGRFAM: stage III sporulation protein AB; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
  
  
 0.863
AEE96199.1
Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR011642: IPR014226; KEGG: tpd:Teth39_1298 nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein; SPTR: Sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ.
 
   
 0.858
AEE95975.1
InterPro IPR014211; KEGG: amt:Amet_2495 sporulation stage III, protein AD; SPTR: Sporulation stage III, protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
  
 0.847
AEE96646.1
Stage II sporulation protein M; InterPro IPR002798: IPR014196; KEGG: amt:Amet_2522 sporulation stage II, protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Stage II sporulation protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
   
 0.806
AEE96291.1
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: tex:Teth514_1340 PhoH family protein; PFAM: PhoH family protein; SPTR: PhoH family protein; PFAM: PhoH-like protein.
       0.802
AEE96769.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.791
AEE95976.1
InterPro IPR014194; KEGG: amt:Amet_2496 sporulation stage III, protein AE; PFAM: Sporulation stage III protein AE; SPTR: Sporulation stage III, protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
  
 0.779
AEE95974.1
InterPro IPR009570; KEGG: tmt:Tmath_1134 stage III sporulation protein AC; SPTR: Stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.
  
  
 0.738
AEE96594.1
Spore germination protein; InterPro IPR004761; KEGG: amt:Amet_0513 spore germination protein; PFAM: Spore germination protein; SPTR: Spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
  
     0.735
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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