STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96323.1Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: dau:Daud_0961 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (164 aa)    
Predicted Functional Partners:
AEE96322.1
Hypothetical protein; InterPro IPR012902; KEGG: smt:Smal_0550 type II secretory pathway pseudopilin; SPTR: Type II secretory pathway pseudopilin; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.794
AEE96321.1
KEGG: hor:Hore_06020 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.782
AEE96325.1
Fimbrial assembly family protein; InterPro IPR007813; KEGG: cps:CPS_0468 type IV pilus biogenesis protein PilN; PFAM: Fimbrial assembly family protein; SPTR: Type IV pilus biogenesis protein PilN; PFAM: Fimbrial assembly protein (PilN).
  
  
 0.762
AEE96332.1
Hypothetical protein; InterPro IPR012902; KEGG: slp:Slip_0396 pilin assembly protein; SPTR: Pilin assembly protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.760
AEE96324.1
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: amt:Amet_3474 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: MreB/Mbl protein; Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.
     
 0.753
AEE96328.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR003593: IPR006321; KEGG: tte:TTE1263 pili biogenesis protein PilT-like ATPase; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Predicted ATPases involved in pili biogenesis, PilT homologs; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
     
 0.729
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.685
AEE96329.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482: IPR003593; KEGG: tte:TTE1262 pili biogenesis protein PilB-like ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Predicted ATPases involved in pili biogenesis, PilB homologs; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E.
  
  
 0.684
AEE96326.1
Hypothetical protein; KEGG: tte:TTE1274 fimbrial assembly protein; SPTR: Fimbrial assembly protein; PFAM: General secretion pathway, M protein.
       0.665
AEE96330.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR001992: IPR003004; KEGG: amt:Amet_3480 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
     
 0.659
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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