STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96477.1Protein of unknown function DUF988; COGs: COG4708 membrane protein; InterPro IPR010387; KEGG: tex:Teth514_1496 hypothetical protein; PFAM: protein of unknown function DUF988; SPTR: Putative uncharacterized protein; PFAM: QueT transporter. (159 aa)    
Predicted Functional Partners:
AEE96476.1
COGs: COG3679 conserved hypothetical protein; KEGG: sth:STH1710 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
 
     0.846
rnj
RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.796
AEE96478.1
GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR000795: IPR004161: IPR000640: IPR005225: IPR 006298; KEGG: tit:Thit_0818 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding prot [...]
       0.748
AEE96479.1
Beta-lactamase domain protein; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); KEGG: slp:Slip_1479 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
 
     0.688
queA
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
     0.658
AEE96481.1
Competence protein ComEA helix-hairpin-helix repeat protein; COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR019554: IPR000445: IPR003583: IPR004509; KEGG: tpd:Teth39_1421 helix-hairpin-helix repeat-containing competence protein ComEA; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein Com [...]
       0.645
AEE96480.1
DNA-3-methyladenine glycosylase III; COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR003265; KEGG: mta:Moth_1560 DNA-3-methyladenine glycosylase III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: DNA-3-methyladenine glycosylase III; PFAM: HhH-GPD superfamily base excision DNA repair protein.
       0.644
AEE96474.1
Glucan 1,4-alpha-glucosidase; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR015220: IPR011613: IPR006425; KEGG: tte:TTE1813 hypothetical protein; PFAM: Glucodextranase N; glycoside hydrolase 15-related; PRIAM: Glucan 1,4-alpha-glucosidase; SPTR: Putative uncharacterized protein; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: Glucodextranase, domain N; Glycosyl hydrolases family 15; TIGRFAM: glucan 1,4-alpha-glucosidase.
       0.545
AEE97472.1
Proton-coupled thiamine transporter YuaJ; COGs: COG3859 membrane protein; InterPro IPR012651; KEGG: tte:TTE2512 hypothetical protein; PFAM: thiamine transporter YuaJ; SPTR: Putative uncharacterized protein; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: probable proton-coupled thiamine transporter YuaJ.
  
   
 0.465
AEE96655.1
COGs: COG4684 membrane protein; KEGG: pmo:Pmob_0245 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
   
 0.456
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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