STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEE96621.1MATE efflux family protein; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpo:COPRO5265_0068 Na+-driven multidrug efflux pump; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family. (479 aa)    
Predicted Functional Partners:
AEE96672.1
COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828: IPR020829: IPR020832: IPR020831: IPR 020830: IPR006424; KEGG: csc:Csac_1953 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C [...]
  
  
 0.544
AEE96619.1
Protein of unknown function DUF125 transmembrane; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: tpd:Teth39_1872 hypothetical protein; PFAM: protein of unknown function DUF125 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Rubrerythrin; VIT family.
       0.519
AEE96620.1
Phosphinothricin acetyltransferase; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: bbe:BBR47_09020 putative phosphinothricin acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Phosphinothricin acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
       0.519
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.503
AEE97705.1
COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: tte:TTE2040 ribosomal protein S1; SPTR: Ribosomal protein S1; PFAM: S1 RNA binding domain.
   
    0.415
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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