STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AEE96667.1COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508: IPR014234; KEGG: tmt:Tmath_1888 N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase CwlD; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD. (234 aa)    
Predicted Functional Partners:
AEE96962.1
COGs: COG2385 Sporulation protein and related protein; InterPro IPR013693: IPR014225: IPR013486; KEGG: tex:Teth514_0106 SpoIID/LytB domain-containing protein; PFAM: Stage II sporulation protein D; SPTR: SpoIID/LytB domain; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain.
  
 0.761
AEE95236.1
COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: clj:CLJU_c18660 putative cell wall-binding protein; PFAM: cell wall binding repeat 2-containing protein; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.
 
 
    0.652
AEE96004.1
Sporulation protein YabP; InterPro IPR012504; KEGG: cth:Cthe_2659 YabP-like protein; PFAM: YabP family protein; SPTR: YabP-like protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family; TIGRFAM: sporulation protein YqfC; sporulation protein YabP.
  
  
 0.566
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
       0.519
AEE97594.1
Transglutaminase domain-containing protein; COGs: COG5279 Uncharacterized protein involved in cytokinesis contains TGc (transglutaminase/protease-like) domain; InterPro IPR007253: IPR002931; KEGG: dhd:Dhaf_4476 Ig domain protein group 2 domain protein; PFAM: transglutaminase domain-containing protein; cell wall binding repeat 2-containing protein; SPTR: LytC; PFAM: Transglutaminase-like superfamily; Putative cell wall binding repeat 2.
 
 
    0.512
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.493
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.476
cinA
Competence/damage-inducible protein cinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135: IPR008136: IPR001453; KEGG: cth:Cthe_1052 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal dom [...]
 
     0.430
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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