STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96796.1Hypothetical protein; KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein; SPTR: Putative uncharacterized protein. (392 aa)    
Predicted Functional Partners:
AEE96661.1
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000644: IPR000160; KEGG: cbe:Cbei_3303 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
  
 0.689
AEE95855.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005467: IPR003594: IPR004358: IPR016381: IPR 008595: IPR011712; KEGG: cth:Cthe_1268 histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Sensor protein DegS; Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.593
AEE97538.1
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR003660: IPR000160; KEGG: drm:Dred_0651 diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
 
 0.557
AEE97093.1
Diguanylate cyclase with GAF sensor; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR003018; KEGG: cth:Cthe_1282 diguanylate cyclase with GAF sensor; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
 
 0.517
AEE96184.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.516
AEE96794.1
Ig family protein; COGs: COG2247 Putative cell wall-binding domain; InterPro IPR003343: IPR008009: IPR007253; KEGG: dhd:Dhaf_1937 putative cell wall binding repeat 2-containing protein; PFAM: Ig family protein; Ig domain protein group 2 domain protein; cell wall binding repeat 2-containing protein; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.
       0.498
AEE96795.1
KEGG: gga:415388 tight junction protein 1 (zona occludens 1); SPTR: Putative uncharacterized protein.
       0.498
AEE97434.1
Hypothetical protein; InterPro IPR001387; KEGG: ckr:CKR_2864 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
  
   
 0.469
AEE97102.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173: IPR001440: IPR019734: IPR013026: IPR 001969; KEGG: clj:CLJU_c04550 putative glycosyltransferase; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2.
    
 
 0.419
AEE97951.1
KEGG: cth:Cthe_1636 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.415
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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