STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96844.1KEGG: sro:Sros_1227 hypothetical protein; SPTR: ABC superfamily ATP binding cassette transporter, binding protein. (84 aa)    
Predicted Functional Partners:
AEE96845.1
InterPro IPR010897; KEGG: cth:Cthe_1328 stage II sporulation P; PFAM: Stage II sporulation P family protein; SPTR: Stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P.
       0.746
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
       0.553
AEE96843.1
COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002638: IPR000056; KEGG: tmt:Tmath_0853 quinolinate phosphoribosyl transferase; PFAM: Quinolinate phosphoribosyl transferase; ribulose-phosphate 3-epimerase; SPTR: Quinolinate phosphoribosyl transferase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; Belongs to the NAPRTase family.
       0.447
AEE96840.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tte:TTE2376 hypothetical protein; PFAM: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
       0.407
AEE96841.1
tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.407
AEE96842.1
Hypothetical protein; KEGG: sii:LD85_0415 methane/phenol/toluene hydroxylase; SPTR: Methane/phenol/toluene hydroxylase.
       0.407
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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