STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97380.1Hypothetical protein; COGs: COG0433 ATPase; KEGG: bcl:ABC0060 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87. (618 aa)    
Predicted Functional Partners:
AEE97381.1
NurA domain protein; InterPro IPR018977; KEGG: bcl:ABC0059 hypothetical protein; PFAM: NurA domain; SPTR: NurA domain superfamily; PFAM: NurA domain.
   
 
 0.974
AEE96011.1
Metallophosphoesterase; COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: cth:Cthe_0945 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.
 
   
 0.849
AEE96012.1
SMC domain protein; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cth:Cthe_0944 SMC protein-like protein; PFAM: SMC domain protein; SPTR: SMC domain protein.
 
   
 0.843
AEE96014.1
KEGG: cth:Cthe_1092 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.791
AEE97378.1
InterPro IPR013389: IPR013420; KEGG: chy:CHY_2157 CRISPR-associated Csh1 family protein; PFAM: CRISPR-associated protein TM1802; SPTR: CRISPR-associated protein, Csh1 family; TIGRFAM: CRISPR-associated protein, Csh1 family; CRISPR-associated protein, TM1802 family; PFAM: CRISPR-associated protein TM1802 (cas_TM1802); TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family.
 
     0.586
AEE97377.1
CRISPR-associated protein, Csh2 family; COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR006482: IPR013419; KEGG: chy:CHY_2156 CRISPR-associated Csh2 family protein; PFAM: CRISPR-associated protein TM1801; SPTR: CRISPR-associated protein, Csh2 family; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csh2 family.
       0.453
AEE97379.1
CRISPR-associated protein Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).
       0.453
AEE97382.1
Transcriptional regulator, AbrB family; COGs: COG2002 Regulators of stationary/sporulation gene expression; InterPro IPR007159: IPR006339; KEGG: cbf:CLI_0120 AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain-containing protein; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.
       0.443
AEE95878.1
DNA helicase, putative; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: cte:CT1622 DNA helicase, putative; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF559).
       0.432
AEE95881.1
DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004797: IPR004477: IPR004365; KEGG: cth:Cthe_0606 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; nucleic acid binding OB-fold tRNA/helicase-type; SPTR: DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA int [...]
       0.432
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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