STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97385.1KEGG: csc:Csac_0363 hypothetical protein; SPTR: Putative uncharacterized protein. (466 aa)    
Predicted Functional Partners:
AEE97386.1
ABC-type uncharacterized transport system; InterPro IPR019196; KEGG: csc:Csac_0364 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; PFAM: ABC-type uncharacterized transport system.
     0.973
AEE97387.1
KEGG: csc:Csac_0365 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.958
AEE97388.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: csc:Csac_0366 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
     0.923
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.773
AEE97384.1
RNA methylase; COGs: COG4123 O-methyltransferase; InterPro IPR000241: IPR002052; KEGG: cth:Cthe_2102 methyltransferase small; PFAM: RNA methylase; SPTR: Predicted O-methyltransferase; manually curated; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.
       0.773
AEE97715.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: pjd:Pjdr2_1800 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.723
AEE97717.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_1656 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative bacterial extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.689
AEE96877.1
KEGG: cce:Ccel_0393 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
AEE95676.1
KEGG: pjd:Pjdr2_4247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.672
AEE96510.1
Protein of unknown function DUF296; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: ate:Athe_0204 protein of unknown function DUF296; PFAM: protein of unknown function DUF296; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF296).
  
     0.641
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.