STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97534.1Xylose-binding protein; COGs: COG4213 ABC-type xylose transport system periplasmic component; KEGG: tmt:Tmath_0328 monosaccharide-transporting ATPase; SPTR: Periplasmic binding protein/LacI family transcriptional regulator; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein. (355 aa)    
Predicted Functional Partners:
AEE97531.1
Xylose ABC transporter membrane protein; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: tmt:Tmath_0331 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.973
AEE97533.1
Xylose-binding protein; COGs: COG4213 ABC-type xylose transport system periplasmic component; InterPro IPR001761; KEGG: tmt:Tmath_0329 D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein.
 
  
 
0.950
AEE97537.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: tte:TTE0286 periplasmic sugar-binding proteins; SPTR: Periplasmic sugar-binding proteins; PFAM: family.
 
  
 0.946
AEE97535.1
Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789: IPR000005: IPR020449: IPR018060: IPR 018062; KEGG: tex:Teth514_0224 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Response regulator receiver protein; manually curated; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, A [...]
 
     0.940
AEE97530.1
Xylose-binding protein; COGs: COG4213 ABC-type xylose transport system periplasmic component; InterPro IPR001761: IPR013456; KEGG: tmt:Tmath_0329 D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein.
 
  
 
0.928
xylG
Xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.922
AEE97536.1
Integral membrane sensor signal transduction histidine kinase; COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660: IPR010559: IPR003594: IPR005467; KEGG: tit:Thit_0243 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: Signal transduction histidine kinase, LytS; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.876
AEE97538.1
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR003660: IPR000160; KEGG: drm:Dred_0651 diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.697
AEE97539.1
Adenylyltransferase; InterPro IPR007530; KEGG: dhd:Dhaf_2449 adenylyltransferase; PFAM: adenylyltransferase; SPTR: Putative uncharacterized protein; PFAM: Streptomycin adenylyltransferase.
       0.408
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.