STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97602.1KEGG: tte:TTE2101 hypothetical protein; SPTR: Putative uncharacterized protein. (109 aa)    
Predicted Functional Partners:
AEE97601.1
KEGG: cbi:CLJ_0240 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.728
AEE97603.1
KEGG: abc:ACICU_p0069 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.596
AEE97596.1
KEGG: adg:Adeg_0733 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.559
AEE97604.1
KEGG: cbi:CLJ_0245 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.556
AEE97599.1
AAA ATPase; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: cbi:CLJ_0238 AAA ATPase; SPTR: AAA ATPase; PFAM: Domain of unknown function DUF87.
       0.442
AEE97600.1
KEGG: cbi:CLJ_0239 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer.
       0.437
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.