STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97715.1Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: pjd:Pjdr2_1800 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. (756 aa)    
Predicted Functional Partners:
AEE97717.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_1656 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative bacterial extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
    0.843
AEE96414.1
Transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005: IPR018062: IPR018060; KEGG: pjd:Pjdr2_3016 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
  
     0.743
AEE97385.1
KEGG: csc:Csac_0363 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AEE96510.1
Protein of unknown function DUF296; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: ate:Athe_0204 protein of unknown function DUF296; PFAM: protein of unknown function DUF296; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF296).
  
     0.722
AEE96999.1
KEGG: cdf:CD2547 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
AEE95676.1
KEGG: pjd:Pjdr2_4247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
AEE96724.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR000005: IPR020449: IPR018062: IPR018060; KEGG: ect:ECIAI39_4283 putative DNA-binding transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative DNA-binding transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.667
AEE95679.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cth:Cthe_1046 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
 
   
 0.650
AEE96392.1
ADP-ribosylation/Crystallin J1; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ttr:Tter_2063 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase.
  
     0.624
AEE95672.1
NHL repeat containing protein; InterPro IPR001258: IPR013026: IPR013017; KEGG: dtu:Dtur_1591 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: NHL repeat containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Yip1 domain.
  
     0.621
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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