Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE97724.1KEGG: nth:Nther_2545 hypothetical protein; SPTR: Putative uncharacterized protein. (48 aa)    
Predicted Functional Partners:
AEE97722.1
Protein of unknown function DUF1659; InterPro IPR012454; KEGG: mta:Moth_1793 hypothetical protein; PFAM: protein of unknown function DUF1659; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1659).
 
     0.860
AEE97521.1
KEGG: aoe:Clos_2608 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ComK protein.
 
     0.772
AEE97723.1
KEGG: mta:Moth_1792 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2922).
       0.613
AEE97721.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: aoe:Clos_2530 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
    0.569
AEE96930.1
PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: tte:TTE1973 trypsin-like serine protease; PFAM: PDZ/DHR/GLGF domain protein; SPTR: Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.531
AEE95636.1
COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: amt:Amet_4762 peptidase M1, membrane alanine aminopeptidase-like protein; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Peptidase M1, membrane alanine aminopeptidase-like protein; PFAM: Peptidase family M1.
  
     0.484
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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