STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97730.1IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593: IPR002611; KEGG: tpd:Teth39_0099 DNA replication protein DnaC; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: IstB-like ATP binding protein. (327 aa)    
Predicted Functional Partners:
AEE97729.1
Primosome, DnaD subunit; COGs: COG3935 Putative primosome component and related protein; InterPro IPR017019: IPR006343; KEGG: tpd:Teth39_0100 primosome, DnaD subunit; SPTR: Putative DNA replication protein DnaD; TIGRFAM: primosome, DnaD subunit; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
 
  
 0.958
AEE95616.1
KEGG: tte:TTE0794 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
AEE95527.1
KEGG: cno:NT01CX_1363 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 
 0.672
AEE96674.1
InterPro IPR000424; KEGG: cpf:CPF_2166 single-stranded DNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Probable single stranded binding protein; PFAM: Single-strand binding protein family.
 
   
 0.628
AEE95639.1
KEGG: ate:Athe_1766 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.607
AEE95960.1
KEGG: tit:Thit_0102 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.567
AEE96364.1
NUDIX hydrolase; InterPro IPR000086; KEGG: cce:Ccel_0179 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
  
     0.547
AEE97416.1
COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR012904: IPR003265; KEGG: cac:CA_C2707 8-oxoguanine-DNA-glycosylase; PFAM: 8-oxoguanine DNA glycosylase domain-containing protein; HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: 8-oxoguanine-DNA-glycosylase; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg).
  
     0.540
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.463
AEE96148.1
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281: IPR001347; KEGG: clj:CLJU_c21350 putative RpiR family transcriptional regulator; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; SPTR: Transcriptional regulator, RpiR family; PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
     0.455
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.