STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97751.1Glycoside hydrolase family 39; COGs: COG3664 Beta-xylosidase; InterPro IPR000514; KEGG: csc:Csac_2404 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 39; SPTR: Glycoside hydrolase family 39; PFAM: Glycosyl hydrolases family 39. (503 aa)    
Predicted Functional Partners:
AEE95254.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060: IPR013096: IPR000005; KEGG: cbe:Cbei_4840 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: Helix-turn-helix-domain containing protein, AraC type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
 
      0.899
AEE97465.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395: IPR020471: IPR018170; KEGG: cce:Ccel_1009 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family.
    
  0.806
AEE95681.1
Endo-1,4-beta-xylanase; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: tmt:Tmath_0247 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
  
  
 0.731
AEE96312.1
Glycoside hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000: IPR003961; KEGG: cac:CA_P0116 xylanase; PFAM: glycoside hydrolase family 10; Fibronectin type III domain protein; SMART: glycoside hydrolase family 10; Fibronectin type III domain protein; SPTR: Xylanase; PFAM: Glycosyl hydrolase family 10; Fibronectin type III domain.
 
  
 0.667
AEE97272.1
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
  
     0.548
AEE96273.1
Alpha-galactosidase; InterPro IPR000111: IPR002241; KEGG: pjd:Pjdr2_4264 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Alpha-galactosidase; PFAM: Melibiase.
  
     0.508
AEE95353.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: cce:Ccel_0739 cellulosome protein dockerin type I; PFAM: FG-GAP repeat protein; SPTR: Cellulosome protein dockerin type I.
 
     0.469
AEE97749.1
InterPro IPR004360; KEGG: cce:Ccel_3377 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
     0.465
AEE97455.1
Alpha-L-fucosidase; InterPro IPR016518; KEGG: gym:GYMC10_0113 alpha-L-fucosidase; PRIAM: Alpha-L-fucosidase; SPTR: Alpha-L-fucosidase.
  
     0.450
AEE97750.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006102: IPR006103; KEGG: bde:BDP_2211 LacZ6 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Sugar binding domain protein, glycosyl hydrolase family; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
       0.415
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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