STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97827.1Hypothetical protein; KEGG: pjd:Pjdr2_3732 extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1. (652 aa)    
Predicted Functional Partners:
AEE97828.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: dth:DICTH_0039 transmembrane lipoprotein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Transmembrane lipoprotein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.649
AEE97829.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_1160 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.560
AEE97826.1
Carbohydrate binding family 6; InterPro IPR006626: IPR006584: IPR003343: IPR005084; KEGG: pjd:Pjdr2_0928 parallel beta-helix repeat protein; PFAM: Carbohydrate binding family 6; Ig domain protein group 2 domain protein; SMART: cellulose binding type IV; Parallel beta-helix repeat; SPTR: Parallel beta-helix repeat protein; PFAM: Bacterial Ig-like domain (group 2); Carbohydrate binding module (family 6).
       0.547
AEE95858.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439: IPR003593: IPR013611: IPR017871; KEGG: csc:Csac_2346 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; TOBE domain.
  
 
 0.449
AEE97825.1
Hypothetical protein; KEGG: bfs:BF0767 methyltransferase; SPTR: Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
       0.403
AEE97824.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103; KEGG: gym:GYMC10_3042 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: Beta-galactosidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
       0.401
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.