STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE97929.1Peptidoglycan-binding lysin domain protein; InterPro IPR002502: IPR018392: IPR002482; KEGG: pmo:Pmob_0425 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding lysin domain protein; PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain. (334 aa)    
Predicted Functional Partners:
AEE97930.1
COGs: COG4824 Phage-related holin (Lysis protein); InterPro IPR006480; KEGG: cth:Cthe_1612 toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; SPTR: Toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin.
  
 0.980
AEE95794.1
Baseplate J family protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; InterPro IPR006949; KEGG: gym:GYMC10_5392 baseplate J family protein; PFAM: Baseplate J family protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
  
 
 0.954
AEE95793.1
Hypothetical protein; InterPro IPR020288; KEGG: dae:Dtox_4249 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2634).
  
   0.934
AEE97936.1
COGs: COG5412 Phage-related protein; KEGG: cce:Ccel_2825 hypothetical protein; SPTR: Phage-related protein-like protein.
 
    0.931
AEE95784.1
Hypothetical protein; InterPro IPR020287; KEGG: dae:Dtox_4241 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage tail sheath protein.
  
 
 0.923
AEE97942.1
Phage head-tail adaptor; InterPro IPR008767; KEGG: cth:Cthe_1626 phage head-tail adaptor, putative; SPTR: Putative head-tail adaptor protein; TIGRFAM: phage head-tail adaptor; manually curated; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family.
 
    0.902
AEE97926.1
Recombinase; InterPro IPR011109; KEGG: cth:Cthe_1608 recombinase; PFAM: Recombinase; SPTR: Recombinase; manually curated.
 
    0.878
AEE97940.1
KEGG: cth:Cthe_1624 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.859
AEE97941.1
Phage protein, HK97 gp10 family; InterPro IPR010064: IPR006967; KEGG: cth:Cthe_1625 HK97 family phage protein; PFAM: protein of unknown function DUF646 phage head/tail component; SPTR: Phage protein, HK97 gp10 family; TIGRFAM: phage protein, HK97 gp10 family; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family.
 
    0.856
AEE97934.1
COGs: COG4926 Phage-related protein; InterPro IPR000634: IPR007119; KEGG: cth:Cthe_1616 phage minor structural protein; SPTR: Phage minor structural protein; TIGRFAM: phage minor structural protein; PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region.
 
    0.830
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.