Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE97970.1KEGG: clj:CLJU_c03350 hypothetical protein; SPTR: Putative uncharacterized protein. (75 aa)    
Predicted Functional Partners:
AEE97967.1
KEGG: tex:Teth514_1233 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2815).
       0.830
AEE97968.1
Hypothetical protein; InterPro IPR008162; KEGG: tex:Teth514_1232 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2800).
       0.830
AEE97966.1
COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098: IPR013838: IPR019760; KEGG: tex:Teth514_1234 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: DNA polymerase I; PFAM: DNA polymerase family A.
       0.793
AEE97969.1
KEGG: tex:Teth514_1231 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.782
AEE97965.1
COGs: COG3617 Prophage antirepressor; InterPro IPR003497: IPR005039; KEGG: tex:Teth514_1235 prophage antirepressor; PFAM: phage antirepressor protein; BRO domain protein; SPTR: Prophage antirepressor; PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain.
       0.706
AEE97963.1
KEGG: tex:Teth514_1236 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.572
AEE97962.1
Virulence-associated E family protein; COGs: COG5545 P-loop ATPase and inactivated derivatives; InterPro IPR007936; KEGG: tex:Teth514_1237 virulence-associated E family protein; PFAM: virulence-associated E family protein; SPTR: Virulence-associated E family protein; PFAM: Virulence-associated protein E; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
       0.558
AEE97971.1
Sigma-70 region 4 type 2; InterPro IPR013249; KEGG: tex:Teth514_1230 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4.
       0.550
AEE97964.1
KEGG: rca:Rcas_0567 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.545
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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