Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEE98005.1KEGG: tex:Teth514_0737 hypothetical protein; SPTR: Putative uncharacterized protein. (214 aa)    
Predicted Functional Partners:
AEE98006.1
KEGG: tex:Teth514_0738 type IV secretory pathway VirD4 components-like protein; SPTR: Type IV secretory pathway VirD4 components-like protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
       0.779
AEE98007.1
InterPro IPR015330: IPR014820; KEGG: adg:Adeg_2001 bifunctional DNA primase/polymerase; PFAM: Bifunctional DNA primase/polymerase; Primase 1; SPTR: Bifunctional DNA primase/polymerase; PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1).
       0.658
AEE98008.1
KEGG: tpd:Teth39_0089 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.658
AEE98004.1
InterPro IPR010093; KEGG: dae:Dtox_3698 DNA binding domain protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
       0.442
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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