STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE98012.1InterPro IPR018392: IPR002482; KEGG: slp:Slip_1129 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding lysin domain protein; PFAM: LysM domain. (256 aa)    
Predicted Functional Partners:
AEE98011.1
Heparan-alpha-glucosaminide N-acetyltransferase; COGs: COG4299 conserved hypothetical protein; KEGG: sli:Slin_5410 protein of unknown function DUF2261, transmembrane; PRIAM: Heparan-alpha-glucosaminide N-acetyltransferase; SPTR: Putative uncharacterized protein.
       0.610
AEE98010.1
Transcriptional repressor, LexA family; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006199; KEGG: ate:Athe_2440 transcriptional repressor, LexA family; PFAM: LexA DNA-binding domain protein; SPTR: Transcriptional repressor, LexA family; PFAM: LexA DNA binding domain.
       0.431
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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