STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21304.1PFAM: Fatty acid hydroxylase; KEGG: mca:MCA1012 hypothetical protein. (354 aa)    
Predicted Functional Partners:
EGW21918.1
PFAM: Squalene/phytoene synthase; KEGG: mca:MCA0813 squalene synthase.
  
 0.894
EGW21793.1
TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
   
 0.777
EGW21917.1
TIGRFAM: Hopene cyclase; Squalene cyclase; KEGG: mca:MCA0812 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
   
 0.777
EGW21020.1
Unspecific monooxygenase; KEGG: nmu:Nmul_A2167 cytochrome P450; PFAM: Cytochrome P450.
  
 0.722
EGW21965.1
KEGG: mca:MCA1754 monooxygenase, FAD-binding; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding; FAD dependent oxidoreductase.
   
 0.709
EGW22645.1
PFAM: Monooxygenase, FAD-binding; KEGG: sde:Sde_3485 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases-like.
   
 0.709
EGW22970.1
2-polyprenyl-6-methoxyphenol 4-hydroxylase; KEGG: mca:MCA2769 2-octaprenyl-6-methoxyphenol hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Lycopene beta/epsilon cyclase.
   
 0.709
EGW22971.1
KEGG: nhl:Nhal_3718 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase.
   
 0.709
EGW20909.1
PFAM: Cytochrome P450; KEGG: xau:Xaut_0387 cytochrome P450.
   
 0.661
EGW20998.1
Phosphoesterase; KEGG: mca:MCA2985 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
    
 0.643
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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