STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21487.1PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: tgr:Tgr7_0448 outer membrane protein, OMP85 family. (576 aa)    
Predicted Functional Partners:
EGW21489.1
PFAM: Protein of unknown function DUF490; KEGG: noc:Noc_0371 hypothetical protein.
 
 0.996
EGW22052.1
KEGG: nhl:Nhal_2442 hypothetical protein.
 
 
 0.975
EGW22084.1
KEGG: nwa:Nwat_2311 hypothetical protein.
  
     0.538
EGW21486.1
Malto-oligosyltrehalose trehalohydrolase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: noc:Noc_1681 alpha amylase; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal.
       0.528
EGW19707.1
KEGG: psa:PST_3261 hypothetical protein.
  
     0.444
EGW21488.1
Hypothetical protein.
       0.421
EGW23079.1
AsmA family protein; PFAM: AsmA; KEGG: nwa:Nwat_2097 AsmA family protein.
  
   
 0.404
EGW20911.1
KEGG: mca:MCA1277 outer membrane protein TolC, putative; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein.
  
   
 0.404
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.