STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21568.1PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: psa:PST_1289 TonB-dependent receptor. (665 aa)    
Predicted Functional Partners:
EGW23397.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 
 0.805
EGW21662.1
KEGG: meh:M301_2530 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
 
 
 
 0.773
EGW23456.1
TonB family protein; KEGG: mca:MCA0441 TonB domain-containing protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
 
 
 
 0.764
EGW23522.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 
 0.755
EGW20411.1
Protein TolA; TIGRFAM: Tol-Pal system, TolA; KEGG: mca:MCA1228 TolA protein, putative.
   
 
 0.718
tolB
Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.698
EGW22776.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: mca:MCA2337 TonB-dependent receptor, putative.
   
 
 0.695
EGW21569.1
KEGG: nhl:Nhal_0643 hypothetical protein.
       0.693
EGW22720.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppd:Ppro_1266 TonB-dependent receptor.
 
  
 0.669
EGW23819.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mca:MCA1454 ParA family protein.
  
 
   0.662
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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