STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21626.1Glucan endo-1,6-beta-glucosidase; KEGG: cpi:Cpin_6736 glycoside hydrolase family 30; PFAM: Glycoside hydrolase, family 30; Belongs to the glycosyl hydrolase 30 family. (457 aa)    
Predicted Functional Partners:
EGW21176.1
Beta-glucosidase; KEGG: cps:CPS_2365 xylosidase/arabinosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; Belongs to the glycosyl hydrolase 3 family.
  
 0.967
EGW21636.1
KEGG: hor:Hore_04260 hypothetical protein.
 
     0.722
EGW21627.1
KEGG: hypothetical protein.
 
     0.586
EGW20998.1
Phosphoesterase; KEGG: mca:MCA2985 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
  
  
  0.506
EGW20331.1
KEGG: hypothetical protein.
    
 0.487
EGW21625.1
Glycogen debranching enzyme GlgX; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; KEGG: sfu:Sfum_2956 glycogen debranching enzyme GlgX; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; Alpha-amylase, C-terminal all beta; Belongs to the glycosyl hydrolase 13 family.
     
 0.439
EGW21080.1
PFAM: Acyltransferase 3; KEGG: meh:M301_2266 acyltransferase 3.
  
     0.414
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.