STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21628.1KEGG: sti:Sthe_3416 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system. (86 aa)    
Predicted Functional Partners:
EGW21629.1
KEGG: cyt:cce_0361 hypothetical protein.
       0.779
EGW19891.1
KEGG: amr:AM1_2255 hypothetical protein.
 
     0.692
EGW22671.1
Hypothetical protein.
   
 
 0.624
EGW20342.1
Hypothetical protein; KEGG: lhk:LHK_01548 virulence gene repressor RsaL.
   
 
 0.624
EGW21095.1
KEGG: tin:Tint_1551 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 
 0.624
EGW21430.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.575
EGW22007.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.575
EGW23802.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.575
EGW23812.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.575
EGW20391.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.575
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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