STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21664.1PFAM: Insertion element protein; KEGG: nwa:Nwat_1408 insertion element protein. (93 aa)    
Predicted Functional Partners:
EGW21665.1
PFAM: Transposase, IS1; KEGG: nwa:Nwat_1407 IS1 transposase.
     0.929
EGW21439.1
PFAM: Transposase, IS1; KEGG: nwa:Nwat_1407 IS1 transposase.
     0.818
EGW21481.1
PFAM: Transposase, IS1; KEGG: nwa:Nwat_1407 IS1 transposase.
     0.816
EGW22074.1
Transposase; Manually curated; KEGG: mar:MAE_11690 transposase.
  
    0.649
EGW21441.1
Transposase; Manually curated; KEGG: mar:MAE_11690 transposase.
  
    0.648
EGW23217.1
Transposase; Manually curated; KEGG: mar:MAE_11690 transposase.
  
    0.648
EGW22717.1
KEGG: bwe:BcerKBAB4_1749 hypothetical protein.
  
     0.558
EGW21663.1
PFAM: Hemin uptake protein hemP; KEGG: meh:M301_2531 hemin uptake protein HemP.
  
    0.522
EGW22676.1
KEGG: mar:MAE_47620 hypothetical protein.
  
     0.519
EGW21670.1
PFAM: Transposase, IS4-like; KEGG: pna:Pnap_4408 transposase, IS4 family protein.
  
     0.495
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.