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Mettu_0457 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0457" - CRISPR-associated protein, Crm2 family in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0457CRISPR-associated protein, Crm2 family (634 aa)    
Predicted Functional Partners:
Mettu_0455
CRISPR-associated RAMP protein, Cmr4 family (296 aa)
 
 
 
  0.978
Mettu_0453
CRISPR-associated RAMP protein, Cmr6 family (368 aa)
 
 
 
  0.977
Mettu_0458
CRISPR-associated protein TM1795 family protein (398 aa)
 
          0.973
Mettu_0456
CRISPR-associated protein, Cmr3 (388 aa)
 
          0.973
Mettu_0459
Conserved hypothetical cytosolic protein (315 aa)
 
          0.908
Mettu_0454
CRISPR-associated protein, Cmr5 family (129 aa)
              0.667
Mettu_0446
CRISPR-associated endoribonuclease Cas2 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (92 aa)
 
     
  0.605
cas1
CRISPR-associated endonuclease Cas1 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (303 aa)
   
        0.497
Mettu_0810
CRISPR-associated helicase Cas3 (919 aa)
              0.493
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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