STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21894.1PFAM: Glycosyl transferase, family 2; KEGG: pca:Pcar_2790 N-glycosyltransferase. (442 aa)    
Predicted Functional Partners:
EGW21643.1
PFAM: Polysaccharide deacetylase; KEGG: cpi:Cpin_1868 polysaccharide deacetylase.
 
 
 0.968
EGW21893.1
PFAM: Polysaccharide deacetylase; KEGG: mms:mma_2648 hemin storage protein.
 
 
 0.964
EGW21455.1
PFAM: Polysaccharide deacetylase; KEGG: kko:Kkor_1173 polysaccharide deacetylase.
 
 
 0.916
EGW21895.1
KEGG: kko:Kkor_1175 hypothetical protein.
  
 
 0.908
EGW23133.1
PFAM: Protein of unknown function DUF676, hydrolase-like; KEGG: epy:EpC_30280 hypothetical protein.
   
 0.747
EGW20750.1
PFAM: Glycosyl transferase, family 2; KEGG: rca:Rcas_1348 glycosyl transferase family protein.
    
 0.694
EGW23236.1
KEGG: pen:PSEEN3269 hypothetical protein.
   
 
 0.666
EGW23090.1
Von Willebrand factor type A; KEGG: mca:MCA3086 TPR domain-containing protein; PFAM: von Willebrand factor, type A; Tetratricopeptide TPR-1; SMART: von Willebrand factor, type A; Tetratricopeptide repeat; overlaps another CDS with the same product name.
   
 
 0.665
EGW20005.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
   
 0.652
EGW21794.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: slt:Slit_1182 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS.
  
 
 0.646
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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