STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21948.1PFAM: ABC-type uncharacterised transport system; KEGG: mca:MCA3076 hypothetical protein. (460 aa)    
Predicted Functional Partners:
EGW21949.1
PFAM: ABC-2 type transporter; KEGG: mca:MCA3077 ABC transporter, permease protein, putative.
  
 0.972
EGW21950.1
KEGG: mca:MCA3078 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
   
 0.896
hflD
High frequency lysogenization protein hflD; KEGG: mca:MCA0201 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274.
       0.554
EGW21952.1
KEGG: nhl:Nhal_2335 EAL domain protein; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted.
       0.511
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.