STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21985.1PFAM: Cupin 2, conserved barrel; KEGG: mca:MCA0909 hypothetical protein. (131 aa)    
Predicted Functional Partners:
EGW20829.1
PFAM: CheC-like protein; KEGG: gca:Galf_2225 CheC, inhibitor of MCP methylation.
    
   0.590
EGW21984.1
PFAM: Protein of unknown function DUF6, transmembrane; KEGG: mca:MCA2967 hypothetical protein.
     
 0.585
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.518
EGW22964.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: aeh:Mlg_0100 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.492
EGW20005.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
     
 0.488
argA
Amino-acid N-acetyltransferase; KEGG: mca:MCA2084 N-acetylglutamate synthase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.481
EGW20568.1
TIGRFAM: Amino acid adenylation; KEGG: non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Aminotransferase class-III; Luciferase-like, subgroup; Condensation domain.
     
 0.479
EGW19716.1
KEGG: alv:Alvin_2084 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT.
  
 
 0.474
EGW21250.1
Cupin region; Manually curated; KEGG: dar:Daro_2075 cupin region.
  
  0.462
EGW21254.1
PFAM: Cupin 2, conserved barrel; KEGG: dar:Daro_2075 cupin region.
  
  0.462
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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