STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22152.1KEGG: syf:Synpcc7942_0733 phage portal protein, lambda; TIGRFAM: Phage portal protein, lambda; PFAM: Phage portal protein, lambda. (466 aa)    
Predicted Functional Partners:
EGW22153.1
PFAM: Peptidase U35, phage prohead HK97; KEGG: swi:Swit_2190 peptidase S14, ClpP.
 
    0.953
EGW22147.1
PFAM: Phage terminase GpA; KEGG: xal:XALc_0206 hypothetical phage terminase large subunit protein.
 
  
 0.907
EGW22164.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: sit:TM1040_1291 baseplate J-like protein.
 
   
 0.863
EGW22165.1
KEGG: hde:HDEF_2204 phage tail protein I; TIGRFAM: Phage tail protein I; PFAM: Phage tail protein I.
 
   
 0.856
EGW22162.1
KEGG: avn:Avin_37480 phage P2 baseplate assembly gpV-like protein; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V.
 
   
 0.850
EGW22163.1
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: sit:TM1040_1292 gpW/GP25.
 
     0.832
EGW22169.1
KEGG: wol:WD0574 contractile tail tube protein; TIGRFAM: Phage major tail tube protein; PFAM: Phage major tail tube protein.
 
   
 0.809
EGW22168.1
KEGG: dsa:Desal_2117 tail sheath protein.
 
   
 0.789
EGW22151.1
KEGG: pfl:PFL_1994 hypothetical protein.
       0.773
EGW22176.1
PFAM: Phage late control D; KEGG: wri:WRi_006910 tail protein D, putative.
 
   
 0.765
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.