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Mettu_0953 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0953" - KEGG: syf:Synpcc7942_0733 phage portal protein, lambda in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0953KEGG- syf-Synpcc7942_0733 phage portal protein, lambda; TIGRFAM- Phage portal protein, lambda; PFAM- Phage portal protein, lambda (466 aa)    
Predicted Functional Partners:
Mettu_0954
PFAM- Peptidase U35, phage prohead HK97; KEGG- swi-Swit_2190 peptidase S14, ClpP (644 aa)
 
          0.974
Mettu_0948
PFAM- Phage terminase GpA; KEGG- xal-XALc_0206 hypothetical phage terminase large subunit protein (644 aa)
 
     
  0.919
Mettu_0963
KEGG- avn-Avin_37480 phage P2 baseplate assembly gpV-like protein; TIGRFAM- Phage-related baseplate assembly protein V; PFAM- Phage baseplate assembly protein V (187 aa)
 
          0.878
Mettu_0962
KEGG- xfa-XF2493 hypothetical protein (181 aa)
 
          0.866
Mettu_0964
GPW/gp25 family protein; PFAM- GPW/gp25; KEGG- sit-TM1040_1292 gpW/GP25 (112 aa)
 
          0.865
Mettu_0965
PFAM- Baseplate assembly protein J-like, predicted; KEGG- sit-TM1040_1291 baseplate J-like protein (318 aa)
 
          0.861
Mettu_0966
KEGG- hde-HDEF_2204 phage tail protein I; TIGRFAM- Phage tail protein I; PFAM- Phage tail protein I (187 aa)
 
     
  0.858
Mettu_0969
KEGG- dsa-Desal_2117 tail sheath protein (499 aa)
 
     
  0.852
Mettu_0952
KEGG- pfl-PFL_1994 hypothetical protein (69 aa)
              0.845
Mettu_0970
KEGG- wol-WD0574 contractile tail tube protein; TIGRFAM- Phage major tail tube protein; PFAM- Phage major tail tube protein (167 aa)
 
          0.822
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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