STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22155.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EGW22154.1
Protein of unknown function UCP030771; PFAM: Uncharacterised conserved protein UCP030771; KEGG: hypothetical protein.
       0.773
EGW22156.1
Hypothetical protein.
       0.773
EGW22157.1
KEGG: mmw:Mmwyl1_0576 hypothetical protein.
       0.678
EGW22158.1
KEGG: nhl:Nhal_0980 TraR/DksA family transcriptional regulator.
       0.678
EGW22159.1
Hypothetical protein.
       0.678
EGW22160.1
KEGG: bpr:GBP346_A2712 hypothetical protein.
       0.678
EGW22161.1
KEGG: xfa:XF2493 hypothetical protein.
       0.678
EGW22162.1
KEGG: avn:Avin_37480 phage P2 baseplate assembly gpV-like protein; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V.
       0.678
EGW22163.1
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: sit:TM1040_1292 gpW/GP25.
       0.678
EGW22164.1
PFAM: Baseplate assembly protein J-like, predicted; KEGG: sit:TM1040_1291 baseplate J-like protein.
       0.678
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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