STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22187.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: pmy:Pmen_1612 MotA/TolQ/ExbB proton channel. (204 aa)    
Predicted Functional Partners:
EGW22188.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: avn:Avin_14750 biopolymer transport protein ExbD.
 
 
 0.989
EGW22776.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: mca:MCA2337 TonB-dependent receptor, putative.
 
 
 0.949
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.874
EGW21660.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1022 biopolymer transport protein ExbD/TolR.
 
 
 0.855
EGW23399.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1558 biopolymer transport protein ExbD/TolR.
 
 
 0.844
tolR
Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.832
EGW23454.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mca:MCA0670 biopolymer ExbD/TolR family transporter.
 
 
 0.810
EGW23524.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mca:MCA0670 biopolymer ExbD/TolR family transporter.
 
 
 0.810
EGW21662.1
KEGG: meh:M301_2530 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
 
 
 0.793
EGW23397.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.760
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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