STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22193.1PFAM: PilT protein, N-terminal; KEGG: gpb:HDN1F_02150 hypothetical protein. (135 aa)    
Predicted Functional Partners:
EGW22194.1
PFAM: Protein of unknown function DUF2191; KEGG: gpb:HDN1F_02160 hypothetical protein.
 
 
   0.978
EGW19949.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.810
EGW20961.1
Hypothetical protein; KEGG: noc:Noc_0445 helix-turn-helix protein, CopG.
   
   0.757
EGW23138.1
PFAM: TnsA endonuclease, N-terminal; KEGG: bgf:BC1003_0016 hypothetical protein.
  
     0.706
EGW20008.1
PFAM: Ankyrin repeat; KEGG: ami:Amir_3666 ankyrin.
  
     0.702
EGW19998.1
Glycosyltransferase, MGT family; KEGG: npu:Npun_F3456 UDP-glucuronosyltransferase-like glycosyl transferase; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.644
EGW22716.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: gur:Gura_0778 TonB-dependent receptor.
  
     0.638
EGW22720.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppd:Ppro_1266 TonB-dependent receptor.
  
     0.637
EGW22195.1
KEGG: cts:Ctha_2404 hypothetical protein.
       0.628
EGW22196.1
NnrS family protein; PFAM: NnrS; KEGG: tbd:Tbd_1409 hypothetical protein.
       0.628
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.