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Mettu_1212 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1212" - Superoxide dismutase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
Mettu_1212Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (193 aa)    
Predicted Functional Partners:
Mettu_3612
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)
   
  0.995
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
   
  0.946
Mettu_3391
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (301 aa)
   
 
  0.927
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (95 aa)
   
 
  0.899
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
 
  0.874
rplQ
TIGRFAM- Ribosomal protein L17; HAMAP- 50S ribosomal protein L17; KEGG- hch-HCH_06192 50S ribosomal protein L17; PFAM- Ribosomal protein L17 (125 aa)
     
 
  0.835
rpmA
TIGRFAM- Ribosomal protein L27; HAMAP- Ribosomal protein L27; KEGG- 50S ribosomal protein L27; PFAM- Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (85 aa)
     
      0.835
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
     
  0.804
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (227 aa)
   
 
  0.804
rpsI
PFAM- Ribosomal protein S9; KEGG- mca-MCA0905 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (131 aa)
   
  0.799
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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