STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22754.1KEGG: azo:azo2555 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (240 aa)    
Predicted Functional Partners:
EGW22753.1
PFAM: Outer membrane efflux protein; KEGG: rce:RC1_3821 outer membrane efflux protein.
 
  0.975
EGW22755.1
KEGG: rce:RC1_3819 hypothetical protein.
 
     0.947
EGW22756.1
PFAM: Secretion protein HlyD; KEGG: rce:RC1_3818 hypothetical protein.
 
     0.946
macB
Phosphonate-transporting ATPase; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.934
EGW22290.1
PFAM: Outer membrane efflux protein; KEGG: cvi:CV_0465 hypothetical protein.
 
  0.905
EGW22752.1
Outer membrane adhesin like proteiin; TIGRFAM: VCBS repeat domain; PFAM: Putative Ig; KEGG: cch:Cag_1242 VCBS; SMART: Dystroglycan-type cadherin-like.
 
     0.832
EGW22288.1
KEGG: rce:RC1_3819 hypothetical protein.
 
     0.778
EGW22287.1
PFAM: Peptidase M50; KEGG: pvi:Cvib_0429 peptidase M50.
 
     0.777
EGW21127.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: rca:Rcas_2537 hypothetical protein.
 
 
 0.772
EGW22637.1
KEGG: mmb:Mmol_0046 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein.
 
 0.757
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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