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Mettu_1578 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1578" - HlyD family secretion protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1578HlyD family secretion protein (240 aa)    
Predicted Functional Partners:
Mettu_1580
Secretion protein HlyD family protein (708 aa)
 
          0.981
Mettu_1579
Putative uncharacterized protein (444 aa)
 
          0.981
Mettu_1577
Outer membrane efflux protein (512 aa)
 
          0.978
Mettu_1576
Outer membrane adhesin like proteiin (6210 aa)
 
          0.905
Mettu_1097
Outer membrane efflux protein (518 aa)
 
          0.875
Mettu_1095
Putative uncharacterized protein (457 aa)
 
          0.875
Mettu_1094
Peptidase M50 (704 aa)
 
          0.875
Mettu_1575
Putative uncharacterized protein (64 aa)
              0.541
Mettu_1102
Hemolysin-type calcium-binding region (1392 aa)
 
          0.460
Mettu_1574
ATP-binding region ATPase domain protein (659 aa)
              0.427
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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