STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW22859.1PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: cyp:PCC8801_3690 restriction endonuclease. (277 aa)    
Predicted Functional Partners:
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.576
EGW21367.1
KEGG: mma:MM_2294 type I restriction-modification system specificity subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; PFAM: DNA methylase, adenine-specific.
 
  
 0.539
EGW23639.1
KEGG: gca:Galf_2917 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase, adenine-specific.
 
  
 0.510
EGW23148.1
PFAM: DNA methylase, adenine-specific; KEGG: nhl:Nhal_0751 N-6 DNA methylase.
 
  
 0.504
EGW23105.1
PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: gbm:Gbem_3568 restriction endonuclease; SMART: DEAD-like helicase, N-terminal.
  
  
 0.458
EGW23638.1
PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: gca:Galf_2916 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal.
  
  
 0.458
EGW22857.1
PFAM: PilT protein, N-terminal; KEGG: ava:Ava_1729 PilT protein-like.
       0.449
EGW22858.1
Transcriptional regulator, AbrB family; KEGG: gox:GOX2681 hypothetical protein; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted.
       0.449
EGW23109.1
Nucleotidyltransferase substrate binding protein, HI0074 family; KEGG: gbm:Gbem_3570 type I restriction-modification system DNA adenine N6-methyltransferase; TIGRFAM: Nucleotidyltransferase substrate binding protein, HI0074; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; DNA methylase, adenine-specific.
  
  
 0.434
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.418
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.