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Mettu_1690 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1690" - PFAM: Restriction endonuclease, type IV-like, Mrr in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1690PFAM- Restriction endonuclease, type IV-like, Mrr; KEGG- cyp-PCC8801_3690 restriction endonuclease (277 aa)    
Predicted Functional Partners:
murJ
Probable lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (512 aa)
              0.633
Mettu_1689
Transcriptional regulator, AbrB family; KEGG- gox-GOX2681 hypothetical protein; TIGRFAM- Transcription regulator AbrB; PFAM- Transcription regulator AbrB/SpoV, predicted (82 aa)
              0.475
Mettu_1688
PFAM- PilT protein, N-terminal; KEGG- ava-Ava_1729 PilT protein-like (144 aa)
              0.475
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
              0.460
Mettu_2838
TIGRFAM- UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG- mca-MCA2203 UTP-glucose-1-phosphate uridylyltransferase; PFAM- Nucleotidyl transferase (293 aa)
           
  0.457
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (124 aa)
           
  0.457
Mettu_1991
KEGG- sli-Slin_6260 restriction modification system DNA specificity domain protein (435 aa)
 
     
  0.419
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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