STRINGSTRING
Mettu_1908 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1908" - Branched-chain amino acid aminotransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1908Branched-chain amino acid aminotransferase (308 aa)    
Predicted Functional Partners:
Mettu_2231
Dihydroxy-acid dehydratase (617 aa)
   
  0.998
Mettu_0785
Dihydroxy-acid dehydratase (562 aa)
   
  0.998
leuA
Alpha-isopropylmalate synthase ; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (514 aa)
 
  0.973
Mettu_2507
6-phosphogluconate dehydratase (606 aa)
   
  0.969
Mettu_2825
Chorismate mutase (361 aa)
   
 
  0.963
Mettu_1040
Homoserine dehydrogenase (436 aa)
   
 
  0.952
Mettu_3389
Homocitrate synthase (374 aa)
   
  0.939
Mettu_4081
Aspartokinase (408 aa)
   
 
  0.935
ilvC
Alpha-keto-beta-hydroxylacyl reductoisomerase (338 aa)
 
 
  0.926
Mettu_0896
O-succinylhomoserine sulfhydrylase (393 aa)
     
  0.914
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]