STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23088.1KEGG: mca:MCA3087 hypothetical protein. (562 aa)    
Predicted Functional Partners:
EGW23093.1
PFAM: Protein of unknown function DUF58; KEGG: mca:MCA3083 hypothetical protein.
 
  
 0.942
EGW23090.1
Von Willebrand factor type A; KEGG: mca:MCA3086 TPR domain-containing protein; PFAM: von Willebrand factor, type A; Tetratricopeptide TPR-1; SMART: von Willebrand factor, type A; Tetratricopeptide repeat; overlaps another CDS with the same product name.
 
 
 0.932
EGW23091.1
Von Willebrand factor type A; KEGG: mca:MCA3085 BatB protein, putative; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; overlaps another CDS with the same product name.
 
   
 0.910
EGW23092.1
KEGG: gpb:HDN1F_30440 hypothetical protein.
 
   
 0.910
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.812
EGW22114.1
Adenylate/guanylate cyclase with Chase sensor; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mgm:Mmc1_1858 adenylate/guanylate cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase.
    
  0.810
EGW23094.1
PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: mca:MCA2741 hypothetical protein.
 
  
 0.808
EGW23089.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: alv:Alvin_0250 PfkB domain-containing protein.
       0.737
EGW20347.1
TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: alv:Alvin_0264 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
   
   0.686
EGW21795.1
MCP methyltransferase/methylesterase, CheR/CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; KEGG: pin:Ping_1840 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type.
    
 0.586
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.