STRINGSTRING
Mettu_2000 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2000" - Ankyrin in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2000Ankyrin (180 aa)    
Predicted Functional Partners:
Mettu_0730
Serine/threonine protein kinase (448 aa)
   
  0.981
Mettu_1170
Protein serine/threonine phosphatase (578 aa)
   
  0.979
apaH
Diadenosine tetraphosphatase ; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (281 aa)
   
    0.877
Mettu_2046
Serine/threonine protein kinase (299 aa)
   
  0.849
rpsC
30S ribosomal protein S3 ; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (223 aa)
     
      0.823
mpl
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ; Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate (450 aa)
              0.796
Mettu_1354
Tetratricopeptide TPR_2 repeat-containing protein (581 aa)
 
  0.786
Mettu_3357
Ankyrin (150 aa)
   
          0.778
Mettu_1358
Mov34/MPN/PAD-1 family protein (140 aa)
     
    0.774
Mettu_3886
Fibronectin type III domain protein (3056 aa)
   
    0.727
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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