STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (338 aa)    
Predicted Functional Partners:
trpF
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mca:MCA2496 N-(5'phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
 
 0.999
EGW22634.1
TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: prw:PsycPRwf_1153 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal.
 
 0.999
trpC
KEGG: psp:PSPPH_0674 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
 
 0.999
EGW23500.1
TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: mca:MCA2585 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal.
 
 0.999
EGW22635.1
KEGG: abm:ABSDF3336 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Trp repressor; Anthranilate synthase component I, N-terminal.
 0.998
EGW21099.1
TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: mca:MCA2870 para-aminobenzoate synthase, component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal.
 0.998
EGW23501.1
PFAM: Anthranilate synthase component I, N-terminal; KEGG: mca:MCA2584 anthranilate synthase component I.
 
 0.995
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.990
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 0.983
EGW19716.1
KEGG: alv:Alvin_2084 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT.
 
 
 0.925
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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