STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23180.1Efflux transporter, RND family, MFP subunit; KEGG: mca:MCA2719 heavy metal efflux system protein, putative; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (370 aa)    
Predicted Functional Partners:
EGW23182.1
KEGG: mca:MCA2720 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.983
EGW23179.1
KEGG: mca:MCA2718 hypothetical protein.
 
  0.971
macB
Phosphonate-transporting ATPase; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.934
EGW20307.1
KEGG: noc:Noc_1530 heavy metal efflux pump; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.896
EGW20839.1
PFAM: Acriflavin resistance protein; KEGG: mca:MCA0079 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.884
EGW23183.1
KEGG: mmb:Mmol_1761 hypothetical protein.
       0.814
EGW23181.1
Hypothetical protein.
       0.773
EGW21127.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: rca:Rcas_2537 hypothetical protein.
  
 
 0.741
EGW22608.1
PFAM: Acriflavin resistance protein; KEGG: aba:Acid345_0307 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.735
EGW23382.1
PFAM: Acriflavin resistance protein; KEGG: rsl:RPSI07_mp1697 transport transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.707
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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