STRINGSTRING
Mettu_2128 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2128" - Globin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2128Globin (124 aa)    
Predicted Functional Partners:
Mettu_2129
Ferredoxin--NAD(+) reductase (326 aa)
 
        0.921
Mettu_2131
Ferredoxin--NAD(+) reductase (325 aa)
 
        0.688
Mettu_2127
Transcriptional regulator, BadM/Rrf2 family (151 aa)
              0.684
Mettu_2130
MOSC domain containing protein (263 aa)
 
          0.574
Mettu_2126
Putative uncharacterized protein (94 aa)
              0.562
Mettu_1486
Putative uncharacterized protein (110 aa)
   
          0.516
Mettu_2848
Putative uncharacterized protein (247 aa)
   
          0.419
Mettu_1567
Multi-sensor signal transduction histidine kinase (1026 aa)
   
   
    0.405
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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