STRINGSTRING
Mettu_2139 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2139" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2139Putative uncharacterized protein (75 aa)    
Predicted Functional Partners:
Mettu_2138
Putative uncharacterized protein (92 aa)
 
          0.973
Mettu_2244
SMC domain protein (385 aa)
   
          0.689
Mettu_0723
Uroporphyrinogen decarboxylase (URO-D) (342 aa)
   
          0.479
Mettu_2142
Putative uncharacterized protein (82 aa)
              0.448
Mettu_2141
Putative uncharacterized protein (52 aa)
              0.448
Mettu_2140
Filamentation induced by cAMP protein Fic (163 aa)
              0.448
Mettu_3079
Putative uncharacterized protein (84 aa)
   
          0.437
Mettu_4023
Putative uncharacterized protein (93 aa)
   
          0.431
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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