STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23374.1KEGG: azo:azo2364 hypothetical protein. (246 aa)    
Predicted Functional Partners:
EGW23375.1
Hypothetical protein.
       0.566
EGW23138.1
PFAM: TnsA endonuclease, N-terminal; KEGG: bgf:BC1003_0016 hypothetical protein.
  
     0.561
EGW23373.1
Hypothetical protein.
       0.554
EGW21142.1
PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: nhl:Nhal_3056 hypothetical protein.
  
     0.525
EGW23377.1
KEGG: bja:bll6261 hypothetical protein.
 
     0.466
EGW23117.1
Helix-turn-helix domain protein; KEGG: rsc:RCFBP_20815 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.436
EGW21141.1
PFAM: Protein of unknown function DUF1326; KEGG: nhl:Nhal_3068 protein of unknown function DUF1326.
  
     0.426
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.