STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23428.1PFAM: Uncharacterised protein family UPF0150; KEGG: nwa:Nwat_0072 hypothetical protein. (70 aa)    
Predicted Functional Partners:
EGW23587.1
YcfA family protein; PFAM: YcfA-like; KEGG: cph:Cpha266_1441 YcfA family protein.
   
 
 0.859
EGW20672.1
YcfA family protein; PFAM: YcfA-like; KEGG: dma:DMR_05940 hypothetical protein.
   
 
 0.859
EGW22016.1
PFAM: Uncharacterised protein family UPF0150; KEGG: cyh:Cyan8802_4509 protein of unknown function UPF0150.
  
     0.425
EGW23429.1
PFAM: Protein of unknown function DUF81; KEGG: dar:Daro_2922 hypothetical protein.
       0.413
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.