STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23443.1PFAM: Protein of unknown function DUF81; KEGG: mep:MPQ_1580 hypothetical protein. (269 aa)    
Predicted Functional Partners:
EGW21525.1
Protease Do; SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: mca:MCA1467 serine protease, MucD; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
    
 
 0.562
EGW22781.1
Protease Do; SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: mca:MCA2343 protease DO; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
    
 
 0.562
EGW23444.1
PFAM: Protein of unknown function DUF1348; KEGG: aba:Acid345_2217 hypothetical protein.
       0.461
EGW23442.1
KEGG: gca:Galf_1023 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain.
       0.433
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.